STO process need to capture the Non deductible input tax

Dear Expert,

I have a STO process plant to plant same company  with SD delivery like

1. Me21n - Sto creation

2. Vl10bn - delivery & PGI

3.  MIgo - Goods receipt

during this process  Non deductible input tax is 2% applicable, how can i bring this condition and this 2% should calculate our cost of the goods, finally we are paying  to the government this value,this is only for when u do STO out state.

thank...